Breakfast Cupcakes are light and fluffy pancake muffins topped with an airy whipped cream cheese and strawberry preserves “frosting”. Move over Waffle French Toast, Birthday Cupcakes are the new go-to for a fun birthday breakfast (even though they’re easy enough to make year-round!) Who says you can’t have cupcakes for breakfast?!

Breakfast Cupcake wit pink frosting, rainbow color sprinkles and birthday candle in the center.Pin
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Coming up with this recipe was a happy accident. I was working my PB&J Pancakes Sandwiches recipe and ended up testing them several times to arrive at the perfect combination. There was still a ton of pancake batter leftover, and I wasn’t sure what I was going to do with all the extra. I hate wasting food, but I was also too lazy to make 100 pancakes. Does anyone have the patience for that?

Then, just to see what would happen, I poured all the extra batter into muffin tins and popped them in the oven. I couldn’t believe the results! Why hadn’t I thought of this before? They had become the perfect muffin as my daughter Chloe called it (or “cupcake” as my son Kenya chimed in). Inspired to take things one step further, I whisked together some strawberry preserves and cream cheese to make “icing” and — voila — the Breakfast Cupcake was born!

Why I Love Breakfast Cupcakes

  • Kid-Friendly Surprise: The best part about these Breakfast Cupcakes is that you’ll have a new good morning surprise for your family, and they’ll never know these are cupcakes that aren’t loaded with sugar (like these Dark Chocolate Cupcakes). It’ll feel like you’re having a delicious dessert for breakfast without the sugar crash by noon.
  • Quick and Efficient: These pancake muffins are a convenient way to serve pancakes, especially for a crowd. Instead of standing over the stovetop flipping pancake after pancake, you can pour the batter into muffin cups and bake them all at once! Speaking of, my Sheet Pan Pancake recipe is great for quick and easy pancakes for a crowd too!
  • Customizable: Breakfast cupcakes are so much fun because you can add whatever you like to them. You could sprinkle in a few chocolate chips, blueberries or even some mashed raspberries for a raspberry pancake muffin.

The Ingredients:

Ingredients for breakfast cupcakes. From top left going clockwise: cream cheese, baking powder, egg, peanut butter, jam, flour, sugar, salt and milk.Pin
  • All purpose flour: The foundation of the breakfast cupcake.
  • Baking powder: This ingredients acts as the leavening agent, helping the cupcakes rise evenly in the oven.
  • Peanut butter: Gives a delicious nutty flavor for this recipe while adding a bit of protein too.
  • Egg: The egg binds everything together and gives the cupcake structure.
  • Sugar: We use very little sugar in this recipe, but just enough to make this a nice breakfast treat!
  • Milk: Provides moisture and tenderness for the perfect decadent breakfast cupcake.
  • Cream cheese: Whether you use whipped or regular cream cheese, this ingredient forms a delicious base for our simple cupcake frosting.
  • Jelly, jam, or preserves of your choice: Add a burst of fruity sweetness to our frosting, infusing each bite with delightful flavor.

*See recipe card for full list of ingredients with measurements*

Substitutions and Variations:

There are plenty of ways to make this recipe suit your tastes and preferences.

  • Type of Nut/Seed Butter: If you have a nut allergy you need to consider, this recipe works with any nut or seed butter you prefer. Feel free to use sunflower seed butter, almond butter or even cashew butter.
  • Type of Flour: The texture will be affected slightly, but feel free to use your preferred flour. Whole wheat, white whole wheat or a cup-for-cup gluten free flour would work in this recipe.
  • For the Sugar: Honey, agave or maple syrup could be used in place of the sugar in this recipe. The texture will vary slightly but won’t majorly affect the recipe overall.
  • Egg Substitutions: While I haven’t tested it out, I’ve had readers say they experimented with using egg replacers in this recipe and they turned out great. Other commenters mentioned substituting 1/4 cup Greek yogurt for the egg. Again, I didn’t try it out myself so do with that what you will 🙂
  • Flavor Variations: Feel free to add chocolate chips, fresh berries or anything you’d normally enjoy added into your pancakes!

How to Make Breakfast Cupcakes

A bowl with combined wet ingredients and a seprate bowl next to it with the combined dry ingredients.Pin

Step 1: Whisk the flour, baking powder and salt in a bowl until thoroughly incorporated. In a separate bowl, whisk the peanut butter, egg and sugar until combined, then whisk in the milk until incorporated.

breakfast cupcake batter in a mixing bowlPin

Step 2: Whisk the wet ingredients into the dry ingredients until just combined. You don’t want to over beat the mixture.

a 12 cup muffin tin with batter in each well.Pin

Step 3: Grease or line muffin tins and fill 2/3 of the way up with the batter.

baked breakfast cupcakes in muffin tinPin

Step 4: Bake for 20 minutes or until a toothpick comes out clean. Allow to cool completely then topping with jelly frosting.

*See recipe card for jelly frosting instructions*

Frequently Asked Questions

How do I store leftover Breakfast Cupcakes?

Keep your Breakfast Cupcakes fresh by storing them in an airtight container in the refrigerator for up to 4 days. When you’re ready to enjoy your Breakfast Cupcakes, simply reheat them in the microwave, toaster oven, or oven until warmed through.

Can I freeze Breakfast Cupcakes?

Yes! Extend the shelf life of your Breakfast Cupcakes by freezing them. After allowing them to cool completely, place unfrosted cupcakes on a baking sheet and freeze for 1-2 hours. Once frozen, transfer them to a freezer bag or container. They can remain in the freezer for up to 3 months.

Can I use this pancake muffin batter to make regular pancakes?

Yes, this batter is able to be used to make pancakes.

Can I use a mini muffin tin to make Breakfast Cupcakes?

Yes! If you want mini muffins, follow the instructions adjusting the cook time to 18-20 minutes or until a toothpick comes out clean.

A serving platter with 10 breakfast cupcakes with jelly frosting and rainbow colored sprinkles. Pin

More “Cupcakes” for Breakfast

I’m so happy I stumbled upon making these Breakfast Cupcakes. Accidents happen, and aren’t they delicious?! Now, this recipe a go-to for my kids’ birthday breakfasts every year and they love it! Who says you can’t have your (breakfast cup)cake and eat it too! If you loved this recipe, consider leaving a comment and a rating below!

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Breakfast Cupcakes

Breakfast Cupcakes are light and fluffy pancake muffins and topped with an airy whipped cream cheese and strawberry preserves “frosting”. They make the perfect special birthday breakfast, but they're really a treat that you can happily serve any time of year!
4.17 from 6 votes
Course: Breakfast
Cuisine: American
Servings: 12
Prep Time 5 minutes
Cook Time 20 minutes
Total Time 25 minutes

Equipment

Ingredients  

Breakfast Cupcakes:

Jelly Frosting:

  • 1/2 cup whipped or regular cream cheese, room temperature
  • 1/4 cup jelly, jam or preserves

Instructions 

  • Preheat oven to 350°F.
  • Whisk the flour, baking powder and salt in a bowl.
  • In a separate bowl, whisk the peanut butter, egg and sugar until combined, then whisk in the milk until incorporated.
  • Whisk the wet ingredients into the dry ingredients until just combined (you don't want to over beat the mixture).
  • Grease or line a standard 12 cup muffin tin and fill 2/3 of the way up with the batter.
  • Bake for 20-25 minutes or until a toothpick comes out clean.
  • Cool cupcakes completely. Spread the top of each cupcake with frosting (instructions below) and serve.

Jelly Frosting:

  • Place all ingredients in a bowl and whisk until throughly combined (you want the mixture to be smooth like frosting).
  • Spread on cupcakes and serve.

Video

Notes

To Store: Keep your Breakfast Cupcakes fresh by storing them in an airtight container in the refrigerator for up to 4 days.
To Freeze: After allowing them to cool completely, place unfrosted cupcakes on a baking sheet and freeze for 1-2 hours. Once frozen, transfer them to a freezer bag or container. They can remain in the freezer for up to 3 months.
To Reheat: When you’re ready to enjoy your Breakfast Cupcakes, simply reheat them in the microwave, toaster oven, or oven until warmed through.
For Mini Muffins: Adjust cook time for mini muffins to 18-20 minutes or until a toothpick comes out clean.
 

Nutrition

Calories: 146kcal | Carbohydrates: 19g | Protein: 4g | Fat: 7g | Saturated Fat: 3g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 2g | Trans Fat: 0.002g | Cholesterol: 25mg | Sodium: 148mg | Potassium: 68mg | Fiber: 1g | Sugar: 6g | Vitamin A: 150IU | Vitamin C: 1mg | Calcium: 57mg | Iron: 1mg
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About the Author

Catherine is a mama of three. A Kentucky girl living in California. Here’s what I know: all kids can be great eaters and mealtime must be easy. I create simple, healthy recipes the whole family will love.

Comments

  1. I’d be interested to know if anyone has made these substituting in all or partial almond flour (or cashew flour, etc) and how they turned out if so!

  2. We ve tried this recipe a couple times with organic low sodium peanut butter and a few different accidental and intentional variations – and still comes out great. For example added some avocado since I’ve been reading how it’s recommended as partial replacement for oil. I realized after mashing some avocado this recipe doesn’t call for oil, included it anyway and the muffins came out more moist but without the avocado taste coming thru. Phew and Yay! Thanks so much!

  3. So weird! I know that baking powder can have a weird reaction in baked goods where it turns green. I don’t know all the science behind it, but that’s probably what happened.

  4. I made this cupcakes and they are delicious. I stored the left overs in an airtight container. I came back a few hours later and they were bright green!!! Still smell normal but I’m wondering what happened?

  5. My 16 month old son is picky about TEXSTURES in his foods. I tried baking these as muffins and he liked them, but would spit out after chewing. I made them as pancakes instead and he ate them all without a problem. Thanks so much for another great recipe 🙂

  6. Just made these this morning and both kiddos loved them…such a relief since they haven’t been liking anything lately. My 4 year old son is on his 4th one and my 16 month daughter is on her second. Thank you.

  7. Hi There
    Love your recipes – can I substitute the sugar with honey or agave syrup or molasses etc?
    Thanks again

  8. Delicious! (I mean, weelicious!) I can’t use egg, so I subbed with EnerG egg replacer and it worked just fine. Frosted with cream cheese/ raspberry jam/powdered sugar. (And if I’m being honest, there were also some chocolate chips involved . . .) Love these!

4.17 from 6 votes (6 ratings without comment)

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